I posted this already as a reply to a thread that was about the CiviCRM compatibility issues, specifically related to the top menu that CiviCRM has. However, I wanted to re-post this as instructed with the Feature Request prefix to see if this could be included in future updates.
1) Please add the following code to the index.php template file at line 66...
<div id="toolbar-box"><div class="m"></div></div>
2) Also, I have created a CSS override for the CiviCRM toolbar menu that I've attached.
(I've also attached a screenshot of the aftermath)
Thank you for all the great work you do. We love MissionControl and so do our clients!